Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMCC3Q9ULS5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMCC3Q9ULS5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.17■□□□□ 0.82
TMCC3Q9ULS5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMCC3Q9ULS5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TMCC3Q9ULS5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 MIR6722-201ENST00000617286 78 ntBASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.16■□□□□ 0.82
TMCC3Q9ULS5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.15■□□□□ 0.82
TMCC3Q9ULS5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TMCC3Q9ULS5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 AC103724.3-201ENST00000564481 992 ntBASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.14■□□□□ 0.81
TMCC3Q9ULS5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 KRT8P33-201ENST00000508125 1423 ntBASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 AC103834.1-201ENST00000520383 144 ntBASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 DUX4L4-201ENST00000566884 1269 ntBASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.13■□□□□ 0.81
TMCC3Q9ULS5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMCC3Q9ULS5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 1296.2 ms