Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 MIR6722-201ENST00000617286 78 ntBASIC19.01■□□□□ 0.63
DUX4Q9UBX2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
DUX4Q9UBX2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19■□□□□ 0.63
DUX4Q9UBX2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19■□□□□ 0.63
DUX4Q9UBX2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 GUSBP5-202ENST00000510805 1989 ntBASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-1-201ENST00000616420 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-2-201ENST00000616483 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-4-201ENST00000617390 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-3-201ENST00000622482 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms