Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
DUX4Q9UBX2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 MIR6722-201ENST00000617286 78 ntBASIC19.01■□□□□ 0.63
DUX4Q9UBX2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DUX4Q9UBX2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
DUX4Q9UBX2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19■□□□□ 0.63
DUX4Q9UBX2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19■□□□□ 0.63
DUX4Q9UBX2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DUX4Q9UBX2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19■□□□□ 0.63
DUX4Q9UBX2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DUX4Q9UBX2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 GUSBP5-202ENST00000510805 1989 ntBASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUX4Q9UBX2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.98■□□□□ 0.63
DUX4Q9UBX2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-1-201ENST00000616420 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-2-201ENST00000616483 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-4-201ENST00000617390 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MIR6724-3-201ENST00000622482 92 ntBASIC18.97■□□□□ 0.63
DUX4Q9UBX2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DUX4Q9UBX2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DUX4Q9UBX2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms