Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 AC026271.2-201ENST00000428091 497 ntBASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 AC010141.3-201ENST00000456659 717 ntBASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 AL354811.1-201ENST00000610286 706 ntBASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
MKKSQ9NPJ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.9
MKKSQ9NPJ1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MKKSQ9NPJ1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 AC012414.1-201ENST00000556676 535 ntBASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 AC133561.1-201ENST00000568600 2415 ntBASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.64■□□□□ 0.89
MKKSQ9NPJ1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 MIR6821-201ENST00000617625 74 ntBASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.63■□□□□ 0.89
MKKSQ9NPJ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 AC097381.1-201ENST00000429019 1296 ntBASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MKKSQ9NPJ1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AC105233.4-201ENST00000642045 216 ntBASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MKKSQ9NPJ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 AC027612.3-201ENST00000413684 1047 ntBASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 MIR5787-201ENST00000611784 55 ntBASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKKSQ9NPJ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.59■□□□□ 0.89
MKKSQ9NPJ1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKKSQ9NPJ1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MKKSQ9NPJ1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.58■□□□□ 0.89
MKKSQ9NPJ1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKKSQ9NPJ1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms