Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.26■□□□□ 0.51
Q9N2K0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.26■□□□□ 0.51
Q9N2K0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.26■□□□□ 0.51
Q9N2K0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.26■□□□□ 0.51
Q9N2K0 MIR4787-201ENST00000607364 84 ntBASIC18.26■□□□□ 0.51
Q9N2K0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.26■□□□□ 0.51
Q9N2K0 C17orf82-201ENST00000623772 1530 ntBASIC18.26■□□□□ 0.51
Q9N2K0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Q9N2K0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.26■□□□□ 0.51
Q9N2K0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.26■□□□□ 0.51
Q9N2K0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
Q9N2K0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.25■□□□□ 0.51
Q9N2K0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Q9N2K0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.25■□□□□ 0.51
Q9N2K0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Q9N2K0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.25■□□□□ 0.51
Q9N2K0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q9N2K0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.25■□□□□ 0.51
Q9N2K0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Q9N2K0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.25■□□□□ 0.51
Q9N2K0 AL024507.2-201ENST00000606070 2574 ntBASIC18.25■□□□□ 0.51
Q9N2K0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.24■□□□□ 0.51
Q9N2K0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 AC010542.4-201ENST00000563151 1910 ntBASIC18.24■□□□□ 0.51
Q9N2K0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
Q9N2K0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Q9N2K0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 AC010997.5-201ENST00000609182 354 ntBASIC18.24■□□□□ 0.51
Q9N2K0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Q9N2K0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q9N2K0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.23■□□□□ 0.51
Q9N2K0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.23■□□□□ 0.51
Q9N2K0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.23■□□□□ 0.51
Q9N2K0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.23■□□□□ 0.51
Q9N2K0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 AL137060.1-201ENST00000618151 2648 ntBASIC18.23■□□□□ 0.51
Q9N2K0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Q9N2K0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Q9N2K0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q9N2K0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.23■□□□□ 0.51
Q9N2K0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.22■□□□□ 0.51
Q9N2K0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.22■□□□□ 0.51
Q9N2K0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
Q9N2K0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Q9N2K0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.22■□□□□ 0.51
Q9N2K0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.22■□□□□ 0.51
Q9N2K0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Q9N2K0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Q9N2K0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Q9N2K0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q9N2K0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Q9N2K0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q9N2K0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
Q9N2K0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q9N2K0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Q9N2K0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q9N2K0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q9N2K0 FAM99A-202ENST00000538190 1989 ntBASIC18.21■□□□□ 0.51
Q9N2K0 AC239859.2-201ENST00000444165 318 ntBASIC18.21■□□□□ 0.51
Q9N2K0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.21■□□□□ 0.51
Q9N2K0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q9N2K0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.21■□□□□ 0.51
Q9N2K0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Q9N2K0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
Q9N2K0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Q9N2K0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms