Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF556Q9HAH1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF556Q9HAH1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
ZNF556Q9HAH1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.14■□□□□ 0.82
ZNF556Q9HAH1 AC026310.3-201ENST00000625186 2373 ntBASIC20.14■□□□□ 0.82
ZNF556Q9HAH1 FAM99A-202ENST00000538190 1989 ntBASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF556Q9HAH1 LINC01960-201ENST00000563759 1884 ntBASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 FP325331.1-202ENST00000623531 1380 ntBASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ZNF556Q9HAH1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 AC010542.4-201ENST00000563151 1910 ntBASIC20.12■□□□□ 0.81
ZNF556Q9HAH1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF556Q9HAH1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 AC009086.3-201ENST00000623486 1008 ntBASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF556Q9HAH1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF556Q9HAH1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 SNX5-217ENST00000606557 1087 ntBASIC20.08■□□□□ 0.81
ZNF556Q9HAH1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms