Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 AC103724.3-201ENST00000564481 992 ntBASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CMSS1Q9BQ75 FBXW4P1-201ENST00000426721 2239 ntBASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 AL137060.1-201ENST00000618151 2648 ntBASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CMSS1Q9BQ75 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 AC092667.1-201ENST00000434301 2586 ntBASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CMSS1Q9BQ75 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 AL033527.3-201ENST00000566366 1196 ntBASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 MIR6722-201ENST00000617286 78 ntBASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 AC009086.3-201ENST00000623486 1008 ntBASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.53■□□□□ 0.56
CMSS1Q9BQ75 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMSS1Q9BQ75 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CMSS1Q9BQ75 LINC01960-201ENST00000563759 1884 ntBASIC18.52■□□□□ 0.55
CMSS1Q9BQ75 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 AL031848.2-201ENST00000607670 837 ntBASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms