Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CKAP2Q8WWK9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CKAP2Q8WWK9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 LINC01529-204ENST00000636474 1715 ntBASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
CKAP2Q8WWK9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CKAP2Q8WWK9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CKAP2Q8WWK9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CKAP2Q8WWK9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CKAP2Q8WWK9 CA15P2-201ENST00000611168 834 ntBASIC21.64■■□□□ 1.05
CKAP2Q8WWK9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CKAP2Q8WWK9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CKAP2Q8WWK9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CKAP2Q8WWK9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CKAP2Q8WWK9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 AC120024.1-201ENST00000562672 995 ntBASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 AC019171.1-201ENST00000601251 1056 ntBASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms