Protein–RNA interactions for Protein: Q8WUH2

TGFBRAP1, Transforming growth factor-beta receptor-associated protein 1, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1Q8WUH2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TGFBRAP1Q8WUH2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TGFBRAP1Q8WUH2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TGFBRAP1Q8WUH2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
TGFBRAP1Q8WUH2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TGFBRAP1Q8WUH2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 KRT18P61-201ENST00000585825 1298 ntBASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 AL137784.2-201ENST00000607332 1000 ntBASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.02■■□□□ 1.76
TGFBRAP1Q8WUH2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TGFBRAP1Q8WUH2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
TGFBRAP1Q8WUH2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
TGFBRAP1Q8WUH2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.99■■□□□ 1.75
TGFBRAP1Q8WUH2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TGFBRAP1Q8WUH2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 AC004911.1-201ENST00000416316 871 ntBASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 LINC01960-201ENST00000563759 1884 ntBASIC25.98■■□□□ 1.75
TGFBRAP1Q8WUH2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TGFBRAP1Q8WUH2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 RARRES2P11-201ENST00000635158 484 ntBASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TGFBRAP1Q8WUH2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TGFBRAP1Q8WUH2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms