Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.92■□□□□ 0.78
CNIH3Q8TBE1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNIH3Q8TBE1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 Z98882.1-201ENST00000622160 2253 ntBASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNIH3Q8TBE1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNIH3Q8TBE1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 AF131216.4-201ENST00000638924 1588 ntBASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 AC004448.1-201ENST00000458332 883 ntBASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
CNIH3Q8TBE1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNIH3Q8TBE1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 LINC01521-201ENST00000504184 1943 ntBASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNIH3Q8TBE1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms