Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF169Q8NCN4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 TPRG1LP1-201ENST00000598702 760 ntBASIC23.78■■□□□ 1.4
RNF169Q8NCN4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RNF169Q8NCN4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF169Q8NCN4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 KRT18P61-201ENST00000585825 1298 ntBASIC23.76■■□□□ 1.39
RNF169Q8NCN4 SMUG1P1-201ENST00000590640 811 ntBASIC23.76■■□□□ 1.39
RNF169Q8NCN4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF169Q8NCN4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF169Q8NCN4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF169Q8NCN4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 ANOS2P-203ENST00000472227 1816 ntBASIC23.73■■□□□ 1.39
RNF169Q8NCN4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 AC137761.2-201ENST00000561729 223 ntBASIC23.73■■□□□ 1.39
RNF169Q8NCN4 AC145350.3-201ENST00000569033 163 ntBASIC23.73■■□□□ 1.39
RNF169Q8NCN4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF169Q8NCN4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 AC016769.1-201ENST00000409132 1010 ntBASIC23.72■■□□□ 1.39
RNF169Q8NCN4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 OXCT2P1-201ENST00000447263 1535 ntBASIC23.72■■□□□ 1.39
RNF169Q8NCN4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF169Q8NCN4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 AC004854.2-201ENST00000608450 1441 ntBASIC23.71■■□□□ 1.39
RNF169Q8NCN4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF169Q8NCN4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms