Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM116Q8NCL8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 LINC01960-201ENST00000563759 1884 ntBASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM116Q8NCL8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 AC009102.2-201ENST00000606772 1639 ntBASIC17.21■□□□□ 0.35
TMEM116Q8NCL8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.21■□□□□ 0.34
TMEM116Q8NCL8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.21■□□□□ 0.34
TMEM116Q8NCL8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
TMEM116Q8NCL8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM116Q8NCL8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM116Q8NCL8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 UNC93B8-201ENST00000511903 705 ntBASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM116Q8NCL8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms