Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.25■■□□□ 1.31
TTC39CQ8N584 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.25■■□□□ 1.31
TTC39CQ8N584 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC39CQ8N584 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TTC39CQ8N584 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.24■■□□□ 1.31
TTC39CQ8N584 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TTC39CQ8N584 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC39CQ8N584 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC39CQ8N584 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TTC39CQ8N584 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.23■■□□□ 1.31
TTC39CQ8N584 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC39CQ8N584 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TTC39CQ8N584 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC39CQ8N584 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC39CQ8N584 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC39CQ8N584 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.22■■□□□ 1.31
TTC39CQ8N584 TSPY26P-201ENST00000476365 1326 ntBASIC23.22■■□□□ 1.31
TTC39CQ8N584 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
TTC39CQ8N584 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TTC39CQ8N584 AC137767.1-201ENST00000602918 1920 ntBASIC23.21■■□□□ 1.31
TTC39CQ8N584 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.21■■□□□ 1.31
TTC39CQ8N584 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TTC39CQ8N584 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.21■■□□□ 1.31
TTC39CQ8N584 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.21■■□□□ 1.31
TTC39CQ8N584 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC39CQ8N584 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39CQ8N584 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39CQ8N584 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC39CQ8N584 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39CQ8N584 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.2■■□□□ 1.3
TTC39CQ8N584 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC39CQ8N584 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39CQ8N584 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39CQ8N584 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39CQ8N584 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TTC39CQ8N584 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39CQ8N584 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.18■■□□□ 1.3
TTC39CQ8N584 MIR572-201ENST00000384983 95 ntBASIC23.18■■□□□ 1.3
TTC39CQ8N584 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.18■■□□□ 1.3
TTC39CQ8N584 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39CQ8N584 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39CQ8N584 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
TTC39CQ8N584 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TTC39CQ8N584 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39CQ8N584 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39CQ8N584 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.18■■□□□ 1.3
TTC39CQ8N584 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TTC39CQ8N584 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
TTC39CQ8N584 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC39CQ8N584 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TTC39CQ8N584 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC39CQ8N584 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39CQ8N584 AC233723.2-201ENST00000623798 2106 ntBASIC23.17■■□□□ 1.3
TTC39CQ8N584 OR7E47P-201ENST00000546390 1422 ntBASIC23.16■■□□□ 1.3
TTC39CQ8N584 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TTC39CQ8N584 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39CQ8N584 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 AC242852.2-201ENST00000615738 1807 ntBASIC23.15■■□□□ 1.3
TTC39CQ8N584 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 AC105265.2-201ENST00000467189 838 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms