Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 AC004911.1-201ENST00000416316 871 ntBASIC24.43■■□□□ 1.5
TRIM50Q86XT4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 AC090192.1-201ENST00000517740 490 ntBASIC24.43■■□□□ 1.5
TRIM50Q86XT4 AC087239.1-201ENST00000622671 572 ntBASIC24.43■■□□□ 1.5
TRIM50Q86XT4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.43■■□□□ 1.5
TRIM50Q86XT4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM50Q86XT4 BX005040.4-201ENST00000637145 1518 ntBASIC24.41■■□□□ 1.5
TRIM50Q86XT4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM50Q86XT4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 OXCT2P1-201ENST00000447263 1535 ntBASIC24.4■■□□□ 1.5
TRIM50Q86XT4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM50Q86XT4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
TRIM50Q86XT4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.39■■□□□ 1.5
TRIM50Q86XT4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM50Q86XT4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM50Q86XT4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.37■■□□□ 1.49
TRIM50Q86XT4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM50Q86XT4 AC004854.2-201ENST00000608450 1441 ntBASIC24.35■■□□□ 1.49
TRIM50Q86XT4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.35■■□□□ 1.49
TRIM50Q86XT4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms