Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
ZC3HC1Q86WB0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3HC1Q86WB0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3HC1Q86WB0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
ZC3HC1Q86WB0 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.07
ZC3HC1Q86WB0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 MIR3621-201ENST00000580529 85 ntBASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 AL356740.2-201ENST00000601559 647 ntBASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.7■■□□□ 1.06
ZC3HC1Q86WB0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 AC010542.4-201ENST00000563151 1910 ntBASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 AC099791.2-201ENST00000605725 427 ntBASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3HC1Q86WB0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 pRNA.6-201ENST00000610482 90 ntBASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 pRNA.5-201ENST00000612139 90 ntBASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 pRNA.11-201ENST00000618423 90 ntBASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 pRNA.13-201ENST00000619112 90 ntBASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 AL031602.1-201ENST00000633169 911 ntBASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3HC1Q86WB0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.67■■□□□ 1.06
ZC3HC1Q86WB0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZC3HC1Q86WB0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms