Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
VARS2Q5ST30 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VARS2Q5ST30 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.23■■□□□ 1.31
VARS2Q5ST30 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.23■■□□□ 1.31
VARS2Q5ST30 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.23■■□□□ 1.31
VARS2Q5ST30 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.23■■□□□ 1.31
VARS2Q5ST30 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.23■■□□□ 1.31
VARS2Q5ST30 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
VARS2Q5ST30 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
VARS2Q5ST30 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 KRT18P61-201ENST00000585825 1298 ntBASIC23.22■■□□□ 1.31
VARS2Q5ST30 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.22■■□□□ 1.31
VARS2Q5ST30 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VARS2Q5ST30 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VARS2Q5ST30 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VARS2Q5ST30 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VARS2Q5ST30 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.21■■□□□ 1.31
VARS2Q5ST30 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.2■■□□□ 1.3
VARS2Q5ST30 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
VARS2Q5ST30 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
VARS2Q5ST30 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
VARS2Q5ST30 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VARS2Q5ST30 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VARS2Q5ST30 AC004911.1-201ENST00000416316 871 ntBASIC23.19■■□□□ 1.3
VARS2Q5ST30 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.19■■□□□ 1.3
VARS2Q5ST30 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
VARS2Q5ST30 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.19■■□□□ 1.3
VARS2Q5ST30 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VARS2Q5ST30 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VARS2Q5ST30 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VARS2Q5ST30 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 ID1-201ENST00000376105 1233 ntBASIC23.18■■□□□ 1.3
VARS2Q5ST30 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VARS2Q5ST30 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VARS2Q5ST30 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VARS2Q5ST30 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.18■■□□□ 1.3
VARS2Q5ST30 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.17■■□□□ 1.3
VARS2Q5ST30 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VARS2Q5ST30 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VARS2Q5ST30 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VARS2Q5ST30 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.16■■□□□ 1.3
VARS2Q5ST30 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms