Protein–RNA interactions for Protein: Q5RJH3

Cdh12, Cadherin-12, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh12Q5RJH3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh12Q5RJH3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh12Q5RJH3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh12Q5RJH3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh12Q5RJH3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Gm15546-201ENSMUST00000122095 826 ntBASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh12Q5RJH3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh12Q5RJH3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cdh12Q5RJH3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
Cdh12Q5RJH3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.12■□□□□ 0.49
Cdh12Q5RJH3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh12Q5RJH3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh12Q5RJH3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh12Q5RJH3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms