Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 KRT18P61-201ENST00000585825 1298 ntBASIC26.39■■□□□ 1.82
PDS5AQ29RF7 AC092437.1-201ENST00000624794 1048 ntBASIC26.39■■□□□ 1.82
PDS5AQ29RF7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDS5AQ29RF7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDS5AQ29RF7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.38■■□□□ 1.81
PDS5AQ29RF7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PDS5AQ29RF7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PDS5AQ29RF7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDS5AQ29RF7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PDS5AQ29RF7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PDS5AQ29RF7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PDS5AQ29RF7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.35■■□□□ 1.81
PDS5AQ29RF7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.35■■□□□ 1.81
PDS5AQ29RF7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PDS5AQ29RF7 IKBKGP1-201ENST00000612193 1073 ntBASIC26.35■■□□□ 1.81
PDS5AQ29RF7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDS5AQ29RF7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDS5AQ29RF7 AC079089.2-201ENST00000531211 1277 ntBASIC26.33■■□□□ 1.81
PDS5AQ29RF7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
PDS5AQ29RF7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDS5AQ29RF7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDS5AQ29RF7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 AP004607.4-201ENST00000530158 1459 ntBASIC26.3■■□□□ 1.8
PDS5AQ29RF7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 AL137784.2-201ENST00000607332 1000 ntBASIC26.3■■□□□ 1.8
PDS5AQ29RF7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDS5AQ29RF7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 AC009237.3-201ENST00000393279 1427 ntBASIC26.29■■□□□ 1.8
PDS5AQ29RF7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms