Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
H3F3AP84243 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
H3F3AP84243 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.54■□□□□ 0.72
H3F3AP84243 AC091305.1-201ENST00000479476 895 ntBASIC19.54■□□□□ 0.72
H3F3AP84243 AF213884.3-201ENST00000563833 479 ntBASIC19.54■□□□□ 0.72
H3F3AP84243 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3AP84243 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
H3F3AP84243 RASA4CP-201ENST00000424092 1398 ntBASIC19.54■□□□□ 0.72
H3F3AP84243 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3AP84243 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H3F3AP84243 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.53■□□□□ 0.72
H3F3AP84243 AC099791.1-201ENST00000416440 715 ntBASIC19.53■□□□□ 0.72
H3F3AP84243 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.53■□□□□ 0.72
H3F3AP84243 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
H3F3AP84243 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
H3F3AP84243 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3F3AP84243 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3AP84243 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3AP84243 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.52■□□□□ 0.72
H3F3AP84243 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3F3AP84243 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.52■□□□□ 0.72
H3F3AP84243 AC233723.2-201ENST00000623798 2106 ntBASIC19.52■□□□□ 0.72
H3F3AP84243 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
H3F3AP84243 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H3F3AP84243 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
H3F3AP84243 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
H3F3AP84243 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
H3F3AP84243 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 AC137767.1-201ENST00000602918 1920 ntBASIC19.51■□□□□ 0.71
H3F3AP84243 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
H3F3AP84243 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
H3F3AP84243 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.51■□□□□ 0.71
H3F3AP84243 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
H3F3AP84243 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3AP84243 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
H3F3AP84243 AC010141.3-201ENST00000456659 717 ntBASIC19.5■□□□□ 0.71
H3F3AP84243 AC126544.1-201ENST00000580842 1059 ntBASIC19.5■□□□□ 0.71
H3F3AP84243 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.5■□□□□ 0.71
H3F3AP84243 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3AP84243 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3AP84243 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3AP84243 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.5■□□□□ 0.71
H3F3AP84243 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.5■□□□□ 0.71
H3F3AP84243 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3AP84243 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
H3F3AP84243 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.49■□□□□ 0.71
H3F3AP84243 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.49■□□□□ 0.71
H3F3AP84243 AC142381.2-201ENST00000566120 298 ntBASIC19.49■□□□□ 0.71
H3F3AP84243 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 AC087239.1-201ENST00000622671 572 ntBASIC19.49■□□□□ 0.71
H3F3AP84243 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
H3F3AP84243 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3AP84243 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
H3F3AP84243 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.48■□□□□ 0.71
H3F3AP84243 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
H3F3AP84243 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
H3F3AP84243 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.48■□□□□ 0.71
H3F3AP84243 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.48■□□□□ 0.71
H3F3AP84243 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
H3F3AP84243 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.48■□□□□ 0.71
H3F3AP84243 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
H3F3AP84243 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3AP84243 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.47■□□□□ 0.71
H3F3AP84243 OXCT2P1-201ENST00000447263 1535 ntBASIC19.47■□□□□ 0.71
H3F3AP84243 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 IGHV3-19-201ENST00000521488 291 ntBASIC19.47■□□□□ 0.71
H3F3AP84243 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.47■□□□□ 0.71
H3F3AP84243 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms