Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SKP1P63208 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SKP1P63208 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKP1P63208 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
SKP1P63208 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKP1P63208 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKP1P63208 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKP1P63208 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKP1P63208 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKP1P63208 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SKP1P63208 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SKP1P63208 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SKP1P63208 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SKP1P63208 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.67■□□□□ 0.9
SKP1P63208 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.67■□□□□ 0.9
SKP1P63208 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.67■□□□□ 0.9
SKP1P63208 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.67■□□□□ 0.9
SKP1P63208 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.67■□□□□ 0.9
SKP1P63208 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.67■□□□□ 0.9
SKP1P63208 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKP1P63208 OXCT2P1-201ENST00000447263 1535 ntBASIC20.67■□□□□ 0.9
SKP1P63208 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SKP1P63208 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SKP1P63208 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SKP1P63208 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.66■□□□□ 0.9
SKP1P63208 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.66■□□□□ 0.9
SKP1P63208 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.66■□□□□ 0.9
SKP1P63208 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.66■□□□□ 0.9
SKP1P63208 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SKP1P63208 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SKP1P63208 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SKP1P63208 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SKP1P63208 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SKP1P63208 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKP1P63208 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SKP1P63208 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SKP1P63208 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SKP1P63208 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SKP1P63208 IRS3P-201ENST00000223076 1006 ntBASIC20.65■□□□□ 0.9
SKP1P63208 MIR572-201ENST00000384983 95 ntBASIC20.65■□□□□ 0.9
SKP1P63208 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SKP1P63208 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.65■□□□□ 0.9
SKP1P63208 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.65■□□□□ 0.9
SKP1P63208 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.65■□□□□ 0.9
SKP1P63208 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.65■□□□□ 0.9
SKP1P63208 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKP1P63208 PKD1P6-201ENST00000343738 4769 ntBASIC20.65■□□□□ 0.9
SKP1P63208 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SKP1P63208 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SKP1P63208 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.64■□□□□ 0.89
SKP1P63208 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SKP1P63208 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.64■□□□□ 0.89
SKP1P63208 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.64■□□□□ 0.89
SKP1P63208 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.64■□□□□ 0.89
SKP1P63208 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SKP1P63208 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKP1P63208 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SKP1P63208 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SKP1P63208 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.63■□□□□ 0.89
SKP1P63208 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.63■□□□□ 0.89
SKP1P63208 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.63■□□□□ 0.89
SKP1P63208 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SKP1P63208 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKP1P63208 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.63■□□□□ 0.89
SKP1P63208 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKP1P63208 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SKP1P63208 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKP1P63208 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.62■□□□□ 0.89
SKP1P63208 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.62■□□□□ 0.89
SKP1P63208 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
SKP1P63208 AL358852.1-201ENST00000623174 1268 ntBASIC20.62■□□□□ 0.89
SKP1P63208 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKP1P63208 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.62■□□□□ 0.89
SKP1P63208 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.62■□□□□ 0.89
SKP1P63208 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms