Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 MIR6724-3-201ENST00000622482 92 ntBASIC20.99■□□□□ 0.95
RPL38P63173 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RPL38P63173 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
RPL38P63173 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
RPL38P63173 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPL38P63173 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
RPL38P63173 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPL38P63173 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL38P63173 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPL38P63173 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.98■□□□□ 0.95
RPL38P63173 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.98■□□□□ 0.95
RPL38P63173 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RPL38P63173 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RPL38P63173 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPL38P63173 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.97■□□□□ 0.95
RPL38P63173 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.97■□□□□ 0.95
RPL38P63173 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.97■□□□□ 0.95
RPL38P63173 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 AL117332.1-201ENST00000622628 974 ntBASIC20.97■□□□□ 0.95
RPL38P63173 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.97■□□□□ 0.95
RPL38P63173 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.97■□□□□ 0.95
RPL38P63173 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL38P63173 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.96■□□□□ 0.95
RPL38P63173 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.96■□□□□ 0.95
RPL38P63173 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.96■□□□□ 0.95
RPL38P63173 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL38P63173 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.95■□□□□ 0.95
RPL38P63173 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.95■□□□□ 0.94
RPL38P63173 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.95■□□□□ 0.94
RPL38P63173 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RPL38P63173 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
RPL38P63173 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPL38P63173 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.95■□□□□ 0.94
RPL38P63173 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPL38P63173 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPL38P63173 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 KRT16P3-201ENST00000439127 1283 ntBASIC20.94■□□□□ 0.94
RPL38P63173 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.94■□□□□ 0.94
RPL38P63173 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 AL499627.2-201ENST00000606283 725 ntBASIC20.94■□□□□ 0.94
RPL38P63173 CA15P2-201ENST00000611168 834 ntBASIC20.94■□□□□ 0.94
RPL38P63173 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RPL38P63173 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPL38P63173 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL38P63173 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RPL38P63173 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RPL38P63173 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.93■□□□□ 0.94
RPL38P63173 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPL38P63173 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.93■□□□□ 0.94
RPL38P63173 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.93■□□□□ 0.94
RPL38P63173 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPL38P63173 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPL38P63173 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.93■□□□□ 0.94
RPL38P63173 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPL38P63173 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPL38P63173 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RPL38P63173 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPL38P63173 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPL38P63173 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL38P63173 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL38P63173 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.92■□□□□ 0.94
RPL38P63173 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.92■□□□□ 0.94
RPL38P63173 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.92■□□□□ 0.94
RPL38P63173 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPL38P63173 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL38P63173 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL38P63173 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms