Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN12P56749 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN12P56749 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLDN12P56749 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN12P56749 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN12P56749 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN12P56749 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLDN12P56749 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN12P56749 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN12P56749 PVT1_1.1-201ENST00000615125 194 ntBASIC18.93■□□□□ 0.62
CLDN12P56749 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN12P56749 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 AC073130.3-201ENST00000624389 2278 ntBASIC18.93■□□□□ 0.62
CLDN12P56749 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN12P56749 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN12P56749 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN12P56749 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN12P56749 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDN12P56749 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN12P56749 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN12P56749 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN12P56749 LINC01529-204ENST00000636474 1715 ntBASIC18.91■□□□□ 0.62
CLDN12P56749 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN12P56749 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN12P56749 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN12P56749 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN12P56749 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN12P56749 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLDN12P56749 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLDN12P56749 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN12P56749 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN12P56749 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN12P56749 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN12P56749 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLDN12P56749 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLDN12P56749 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN12P56749 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN12P56749 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN12P56749 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN12P56749 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLDN12P56749 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN12P56749 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN12P56749 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLDN12P56749 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN12P56749 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLDN12P56749 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN12P56749 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN12P56749 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN12P56749 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN12P56749 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN12P56749 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN12P56749 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLDN12P56749 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN12P56749 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms