Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUMO3P55854 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUMO3P55854 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SUMO3P55854 AC137767.1-201ENST00000602918 1920 ntBASIC19.82■□□□□ 0.76
SUMO3P55854 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SUMO3P55854 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SUMO3P55854 OXCT2P1-201ENST00000447263 1535 ntBASIC19.81■□□□□ 0.76
SUMO3P55854 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
SUMO3P55854 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SUMO3P55854 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.81■□□□□ 0.76
SUMO3P55854 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
SUMO3P55854 IGHV3-19-201ENST00000521488 291 ntBASIC19.81■□□□□ 0.76
SUMO3P55854 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.81■□□□□ 0.76
SUMO3P55854 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUMO3P55854 AC133561.1-201ENST00000568600 2415 ntBASIC19.81■□□□□ 0.76
SUMO3P55854 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SUMO3P55854 SUDS3P1-201ENST00000505831 966 ntBASIC19.8■□□□□ 0.76
SUMO3P55854 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.8■□□□□ 0.76
SUMO3P55854 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.8■□□□□ 0.76
SUMO3P55854 GUSBP5-202ENST00000510805 1989 ntBASIC19.8■□□□□ 0.76
SUMO3P55854 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SUMO3P55854 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SUMO3P55854 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.8■□□□□ 0.76
SUMO3P55854 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.8■□□□□ 0.76
SUMO3P55854 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SUMO3P55854 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SUMO3P55854 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SUMO3P55854 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SUMO3P55854 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.79■□□□□ 0.76
SUMO3P55854 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.79■□□□□ 0.76
SUMO3P55854 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SUMO3P55854 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 AL136967.2-201ENST00000623968 743 ntBASIC19.79■□□□□ 0.76
SUMO3P55854 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SUMO3P55854 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.79■□□□□ 0.76
SUMO3P55854 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
SUMO3P55854 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SUMO3P55854 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
SUMO3P55854 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.78■□□□□ 0.76
SUMO3P55854 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 MIR638-201ENST00000385237 100 ntBASIC19.78■□□□□ 0.76
SUMO3P55854 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.78■□□□□ 0.76
SUMO3P55854 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SUMO3P55854 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SUMO3P55854 ECEL1P1-201ENST00000373592 1742 ntBASIC19.77■□□□□ 0.76
SUMO3P55854 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.77■□□□□ 0.76
SUMO3P55854 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.77■□□□□ 0.76
SUMO3P55854 AC142381.2-201ENST00000566120 298 ntBASIC19.77■□□□□ 0.76
SUMO3P55854 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.77■□□□□ 0.76
SUMO3P55854 AC005837.3-201ENST00000612163 286 ntBASIC19.77■□□□□ 0.76
SUMO3P55854 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SUMO3P55854 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SUMO3P55854 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SUMO3P55854 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SUMO3P55854 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SUMO3P55854 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SUMO3P55854 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
SUMO3P55854 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SUMO3P55854 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.76■□□□□ 0.75
SUMO3P55854 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SUMO3P55854 AL117328.2-201ENST00000624617 1940 ntBASIC19.76■□□□□ 0.75
SUMO3P55854 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.76■□□□□ 0.75
SUMO3P55854 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SUMO3P55854 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SUMO3P55854 AC139530.1-201ENST00000575312 1977 ntBASIC19.76■□□□□ 0.75
SUMO3P55854 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SUMO3P55854 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.76■□□□□ 0.75
SUMO3P55854 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SUMO3P55854 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SUMO3P55854 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
SUMO3P55854 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.75■□□□□ 0.75
SUMO3P55854 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SUMO3P55854 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms