Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR3AP46098 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.07■□□□□ 0.8
HTR3AP46098 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.07■□□□□ 0.8
HTR3AP46098 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTR3AP46098 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR3AP46098 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.07■□□□□ 0.8
HTR3AP46098 GUSBP5-202ENST00000510805 1989 ntBASIC20.06■□□□□ 0.8
HTR3AP46098 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HTR3AP46098 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 AC131281.2-201ENST00000520478 145 ntBASIC20.06■□□□□ 0.8
HTR3AP46098 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.06■□□□□ 0.8
HTR3AP46098 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.06■□□□□ 0.8
HTR3AP46098 AC131212.1-201ENST00000613771 668 ntBASIC20.06■□□□□ 0.8
HTR3AP46098 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.06■□□□□ 0.8
HTR3AP46098 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HTR3AP46098 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 ESRRAP2-201ENST00000418437 1549 ntBASIC20.06■□□□□ 0.8
HTR3AP46098 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR3AP46098 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.06■□□□□ 0.8
HTR3AP46098 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
HTR3AP46098 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HTR3AP46098 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 MIR4466-201ENST00000606121 54 ntBASIC20.05■□□□□ 0.8
HTR3AP46098 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HTR3AP46098 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.05■□□□□ 0.8
HTR3AP46098 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.05■□□□□ 0.8
HTR3AP46098 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR3AP46098 ECEL1P1-201ENST00000373592 1742 ntBASIC20.05■□□□□ 0.8
HTR3AP46098 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HTR3AP46098 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.04■□□□□ 0.8
HTR3AP46098 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
HTR3AP46098 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 pRNA.6-201ENST00000610482 90 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 pRNA.5-201ENST00000612139 90 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 pRNA.11-201ENST00000618423 90 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 pRNA.13-201ENST00000619112 90 ntBASIC20.04■□□□□ 0.8
HTR3AP46098 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
HTR3AP46098 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTR3AP46098 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.03■□□□□ 0.8
HTR3AP46098 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.03■□□□□ 0.8
HTR3AP46098 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HTR3AP46098 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HTR3AP46098 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.03■□□□□ 0.8
HTR3AP46098 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTR3AP46098 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR3AP46098 AC006455.2-201ENST00000429931 906 ntBASIC20.02■□□□□ 0.8
HTR3AP46098 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.02■□□□□ 0.8
HTR3AP46098 AL138724.1-201ENST00000606771 1088 ntBASIC20.02■□□□□ 0.8
HTR3AP46098 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR3AP46098 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HTR3AP46098 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR3AP46098 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR3AP46098 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTR3AP46098 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HTR3AP46098 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HTR3AP46098 AC004687.1-201ENST00000579003 1625 ntBASIC20.02■□□□□ 0.79
HTR3AP46098 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR3AP46098 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR3AP46098 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.01■□□□□ 0.79
HTR3AP46098 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HTR3AP46098 SYT6-210ENST00000641643 1587 ntBASIC20.01■□□□□ 0.79
HTR3AP46098 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR3AP46098 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HTR3AP46098 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR3AP46098 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.01■□□□□ 0.79
HTR3AP46098 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms