Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL1P22362 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL1P22362 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL1P22362 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCL1P22362 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCL1P22362 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL1P22362 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL1P22362 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 AL035685.1-201ENST00000636663 812 ntBASIC18.84■□□□□ 0.61
CCL1P22362 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL1P22362 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCL1P22362 AC133637.1-201ENST00000624115 1537 ntBASIC18.84■□□□□ 0.61
CCL1P22362 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL1P22362 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL1P22362 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCL1P22362 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL1P22362 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL1P22362 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL1P22362 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL1P22362 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CCL1P22362 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL1P22362 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL1P22362 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL1P22362 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.83■□□□□ 0.6
CCL1P22362 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.83■□□□□ 0.6
CCL1P22362 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL1P22362 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL1P22362 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL1P22362 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL1P22362 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL1P22362 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCL1P22362 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 AC006455.2-201ENST00000429931 906 ntBASIC18.82■□□□□ 0.6
CCL1P22362 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL1P22362 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCL1P22362 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL1P22362 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL1P22362 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL1P22362 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.81■□□□□ 0.6
CCL1P22362 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL1P22362 pRNA.6-201ENST00000610482 90 ntBASIC18.81■□□□□ 0.6
CCL1P22362 pRNA.5-201ENST00000612139 90 ntBASIC18.81■□□□□ 0.6
CCL1P22362 pRNA.11-201ENST00000618423 90 ntBASIC18.81■□□□□ 0.6
CCL1P22362 pRNA.13-201ENST00000619112 90 ntBASIC18.81■□□□□ 0.6
CCL1P22362 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.81■□□□□ 0.6
CCL1P22362 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCL1P22362 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL1P22362 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCL1P22362 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL1P22362 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.8■□□□□ 0.6
CCL1P22362 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL1P22362 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL1P22362 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL1P22362 GUSBP5-201ENST00000418136 578 ntBASIC18.8■□□□□ 0.6
CCL1P22362 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 MIR3621-201ENST00000580529 85 ntBASIC18.8■□□□□ 0.6
CCL1P22362 AL356740.2-201ENST00000601559 647 ntBASIC18.8■□□□□ 0.6
CCL1P22362 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL1P22362 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CCL1P22362 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL1P22362 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL1P22362 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL1P22362 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL1P22362 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL1P22362 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL1P22362 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL1P22362 FAM99A-202ENST00000538190 1989 ntBASIC18.79■□□□□ 0.6
CCL1P22362 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCL1P22362 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL1P22362 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CCL1P22362 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL1P22362 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms