Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.27■□□□□ 0.84
COX6A1P12074 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COX6A1P12074 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
COX6A1P12074 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
COX6A1P12074 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COX6A1P12074 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.26■□□□□ 0.83
COX6A1P12074 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
COX6A1P12074 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX6A1P12074 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COX6A1P12074 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COX6A1P12074 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.26■□□□□ 0.83
COX6A1P12074 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX6A1P12074 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COX6A1P12074 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX6A1P12074 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.25■□□□□ 0.83
COX6A1P12074 LINC01960-201ENST00000563759 1884 ntBASIC20.25■□□□□ 0.83
COX6A1P12074 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.25■□□□□ 0.83
COX6A1P12074 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.25■□□□□ 0.83
COX6A1P12074 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX6A1P12074 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COX6A1P12074 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX6A1P12074 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX6A1P12074 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
COX6A1P12074 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
COX6A1P12074 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.24■□□□□ 0.83
COX6A1P12074 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX6A1P12074 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COX6A1P12074 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COX6A1P12074 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COX6A1P12074 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX6A1P12074 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.23■□□□□ 0.83
COX6A1P12074 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.23■□□□□ 0.83
COX6A1P12074 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.23■□□□□ 0.83
COX6A1P12074 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.23■□□□□ 0.83
COX6A1P12074 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COX6A1P12074 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
COX6A1P12074 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.23■□□□□ 0.83
COX6A1P12074 AC092437.1-201ENST00000624794 1048 ntBASIC20.23■□□□□ 0.83
COX6A1P12074 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.22■□□□□ 0.83
COX6A1P12074 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.22■□□□□ 0.83
COX6A1P12074 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.22■□□□□ 0.83
COX6A1P12074 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.22■□□□□ 0.83
COX6A1P12074 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.22■□□□□ 0.83
COX6A1P12074 KRT18P61-201ENST00000585825 1298 ntBASIC20.22■□□□□ 0.83
COX6A1P12074 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX6A1P12074 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
COX6A1P12074 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.22■□□□□ 0.83
COX6A1P12074 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.21■□□□□ 0.83
COX6A1P12074 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX6A1P12074 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.21■□□□□ 0.83
COX6A1P12074 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.21■□□□□ 0.83
COX6A1P12074 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COX6A1P12074 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COX6A1P12074 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX6A1P12074 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COX6A1P12074 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
COX6A1P12074 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
COX6A1P12074 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.2■□□□□ 0.82
COX6A1P12074 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.2■□□□□ 0.82
COX6A1P12074 AL137784.2-201ENST00000607332 1000 ntBASIC20.2■□□□□ 0.82
COX6A1P12074 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
COX6A1P12074 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX6A1P12074 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COX6A1P12074 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COX6A1P12074 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COX6A1P12074 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
COX6A1P12074 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COX6A1P12074 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.19■□□□□ 0.82
COX6A1P12074 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.19■□□□□ 0.82
COX6A1P12074 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COX6A1P12074 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COX6A1P12074 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.18■□□□□ 0.82
COX6A1P12074 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COX6A1P12074 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.18■□□□□ 0.82
COX6A1P12074 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
COX6A1P12074 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms