Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CD48P09326 SERBP1P1-201ENST00000396021 1160 ntBASIC22.69■■□□□ 1.22
CD48P09326 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CD48P09326 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.69■■□□□ 1.22
CD48P09326 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.69■■□□□ 1.22
CD48P09326 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CD48P09326 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CD48P09326 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.69■■□□□ 1.22
CD48P09326 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.69■■□□□ 1.22
CD48P09326 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CD48P09326 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.69■■□□□ 1.22
CD48P09326 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CD48P09326 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CD48P09326 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.68■■□□□ 1.22
CD48P09326 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CD48P09326 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CD48P09326 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.68■■□□□ 1.22
CD48P09326 CA15P2-201ENST00000611168 834 ntBASIC22.68■■□□□ 1.22
CD48P09326 AC131212.1-201ENST00000613771 668 ntBASIC22.68■■□□□ 1.22
CD48P09326 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.68■■□□□ 1.22
CD48P09326 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CD48P09326 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
CD48P09326 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CD48P09326 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CD48P09326 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.67■■□□□ 1.22
CD48P09326 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CD48P09326 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.67■■□□□ 1.22
CD48P09326 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.67■■□□□ 1.22
CD48P09326 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CD48P09326 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CD48P09326 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CD48P09326 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.67■■□□□ 1.22
CD48P09326 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CD48P09326 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.67■■□□□ 1.22
CD48P09326 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.67■■□□□ 1.22
CD48P09326 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CD48P09326 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CD48P09326 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CD48P09326 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
CD48P09326 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.66■■□□□ 1.22
CD48P09326 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.66■■□□□ 1.22
CD48P09326 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 AL031602.1-201ENST00000633169 911 ntBASIC22.66■■□□□ 1.22
CD48P09326 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CD48P09326 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
CD48P09326 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CD48P09326 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CD48P09326 AL136116.3-201ENST00000402907 1138 ntBASIC22.65■■□□□ 1.22
CD48P09326 AC010525.1-201ENST00000585559 441 ntBASIC22.65■■□□□ 1.22
CD48P09326 AC092171.4-201ENST00000609130 632 ntBASIC22.65■■□□□ 1.22
CD48P09326 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CD48P09326 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.64■■□□□ 1.22
CD48P09326 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CD48P09326 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CD48P09326 SYT6-210ENST00000641643 1587 ntBASIC22.64■■□□□ 1.22
CD48P09326 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CD48P09326 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CD48P09326 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CD48P09326 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.64■■□□□ 1.21
CD48P09326 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CD48P09326 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CD48P09326 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
CD48P09326 C11orf96-202ENST00000528572 1834 ntBASIC22.64■■□□□ 1.21
CD48P09326 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CD48P09326 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CD48P09326 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CD48P09326 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms