Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC079630.1-202ENST00000618127 1840 ntBASIC23.33■■□□□ 1.32
RB1P06400 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.33■■□□□ 1.32
RB1P06400 AC009237.3-201ENST00000393279 1427 ntBASIC23.33■■□□□ 1.32
RB1P06400 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.32■■□□□ 1.32
RB1P06400 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.32■■□□□ 1.32
RB1P06400 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.32■■□□□ 1.32
RB1P06400 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.32■■□□□ 1.32
RB1P06400 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.32■■□□□ 1.32
RB1P06400 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
RB1P06400 AC005181.1-201ENST00000604782 1256 ntBASIC23.32■■□□□ 1.32
RB1P06400 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RB1P06400 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.32■■□□□ 1.32
RB1P06400 AC005224.4-201ENST00000583262 1652 ntBASIC23.32■■□□□ 1.32
RB1P06400 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.31■■□□□ 1.32
RB1P06400 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.31■■□□□ 1.32
RB1P06400 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.31■■□□□ 1.32
RB1P06400 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.31■■□□□ 1.32
RB1P06400 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.31■■□□□ 1.32
RB1P06400 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.31■■□□□ 1.32
RB1P06400 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.31■■□□□ 1.32
RB1P06400 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RB1P06400 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RB1P06400 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 GUSBP6-202ENST00000438529 1198 ntBASIC23.3■■□□□ 1.32
RB1P06400 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RB1P06400 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.3■■□□□ 1.32
RB1P06400 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RB1P06400 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.3■■□□□ 1.32
RB1P06400 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.3■■□□□ 1.32
RB1P06400 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.29■■□□□ 1.32
RB1P06400 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
RB1P06400 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RB1P06400 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.29■■□□□ 1.32
RB1P06400 AC142381.3-201ENST00000568208 1670 ntBASIC23.28■■□□□ 1.32
RB1P06400 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RB1P06400 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.28■■□□□ 1.32
RB1P06400 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.28■■□□□ 1.32
RB1P06400 SLC29A4P1-201ENST00000398760 971 ntBASIC23.28■■□□□ 1.32
RB1P06400 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RB1P06400 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RB1P06400 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RB1P06400 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.28■■□□□ 1.32
RB1P06400 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RB1P06400 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.27■■□□□ 1.32
RB1P06400 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.27■■□□□ 1.32
RB1P06400 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RB1P06400 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RB1P06400 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.27■■□□□ 1.32
RB1P06400 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.27■■□□□ 1.32
RB1P06400 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.27■■□□□ 1.32
RB1P06400 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.27■■□□□ 1.32
RB1P06400 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.27■■□□□ 1.32
RB1P06400 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.27■■□□□ 1.32
RB1P06400 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.27■■□□□ 1.32
RB1P06400 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RB1P06400 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.27■■□□□ 1.31
RB1P06400 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RB1P06400 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RB1P06400 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.26■■□□□ 1.31
RB1P06400 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RB1P06400 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RB1P06400 AL353803.4-201ENST00000565882 1934 ntBASIC23.25■■□□□ 1.31
RB1P06400 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RB1P06400 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RB1P06400 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.25■■□□□ 1.31
RB1P06400 AL138781.1-201ENST00000566567 1274 ntBASIC23.25■■□□□ 1.31
RB1P06400 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
RB1P06400 UBE2DNL-204ENST00000602536 740 ntBASIC23.25■■□□□ 1.31
RB1P06400 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.25■■□□□ 1.31
RB1P06400 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RB1P06400 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RB1P06400 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms