Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 AC004448.1-201ENST00000458332 883 ntBASIC19.54■□□□□ 0.72
HLA-DPB1P04440 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 SNX5-217ENST00000606557 1087 ntBASIC19.54■□□□□ 0.72
HLA-DPB1P04440 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPB1P04440 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPB1P04440 FAM99A-202ENST00000538190 1989 ntBASIC19.52■□□□□ 0.72
HLA-DPB1P04440 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 AC092028.1-203ENST00000608262 953 ntBASIC19.52■□□□□ 0.72
HLA-DPB1P04440 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DPB1P04440 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPB1P04440 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPB1P04440 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPB1P04440 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 TSPY9P-201ENST00000440215 945 ntBASIC19.51■□□□□ 0.71
HLA-DPB1P04440 TSPY11P-201ENST00000442607 1045 ntBASIC19.51■□□□□ 0.71
HLA-DPB1P04440 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPB1P04440 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.5■□□□□ 0.71
HLA-DPB1P04440 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPB1P04440 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 AC010542.4-201ENST00000563151 1910 ntBASIC19.49■□□□□ 0.71
HLA-DPB1P04440 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPB1P04440 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms