Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAPDHP04406 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAPDHP04406 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
GAPDHP04406 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GAPDHP04406 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.19■□□□□ 0.5
GAPDHP04406 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GAPDHP04406 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
GAPDHP04406 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.19■□□□□ 0.5
GAPDHP04406 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GAPDHP04406 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GAPDHP04406 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.18■□□□□ 0.5
GAPDHP04406 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.18■□□□□ 0.5
GAPDHP04406 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.18■□□□□ 0.5
GAPDHP04406 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GAPDHP04406 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.18■□□□□ 0.5
GAPDHP04406 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAPDHP04406 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.17■□□□□ 0.5
GAPDHP04406 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.17■□□□□ 0.5
GAPDHP04406 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GAPDHP04406 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 AC079630.1-202ENST00000618127 1840 ntBASIC18.17■□□□□ 0.5
GAPDHP04406 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.17■□□□□ 0.5
GAPDHP04406 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GAPDHP04406 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.17■□□□□ 0.5
GAPDHP04406 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GAPDHP04406 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAPDHP04406 AC009102.2-201ENST00000606772 1639 ntBASIC18.16■□□□□ 0.5
GAPDHP04406 AC144652.1-201ENST00000609974 1624 ntBASIC18.16■□□□□ 0.5
GAPDHP04406 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAPDHP04406 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAPDHP04406 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAPDHP04406 AL117332.1-201ENST00000622628 974 ntBASIC18.16■□□□□ 0.5
GAPDHP04406 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
GAPDHP04406 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.16■□□□□ 0.5
GAPDHP04406 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAPDHP04406 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.16■□□□□ 0.5
GAPDHP04406 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GAPDHP04406 FP325331.1-202ENST00000623531 1380 ntBASIC18.16■□□□□ 0.5
GAPDHP04406 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GAPDHP04406 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 AC026310.3-201ENST00000625186 2373 ntBASIC18.15■□□□□ 0.5
GAPDHP04406 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.15■□□□□ 0.5
GAPDHP04406 MIR3621-201ENST00000580529 85 ntBASIC18.15■□□□□ 0.5
GAPDHP04406 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.15■□□□□ 0.5
GAPDHP04406 AC073130.3-201ENST00000624389 2278 ntBASIC18.15■□□□□ 0.5
GAPDHP04406 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAPDHP04406 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
GAPDHP04406 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.14■□□□□ 0.49
GAPDHP04406 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
GAPDHP04406 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAPDHP04406 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.13■□□□□ 0.49
GAPDHP04406 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAPDHP04406 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
GAPDHP04406 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.12■□□□□ 0.49
GAPDHP04406 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms