Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFAP04085 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDGFAP04085 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.35■□□□□ 0.85
PDGFAP04085 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFAP04085 AC137761.2-201ENST00000561729 223 ntBASIC20.35■□□□□ 0.85
PDGFAP04085 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.35■□□□□ 0.85
PDGFAP04085 AC145350.3-201ENST00000569033 163 ntBASIC20.35■□□□□ 0.85
PDGFAP04085 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFAP04085 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFAP04085 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.35■□□□□ 0.85
PDGFAP04085 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PDGFAP04085 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.35■□□□□ 0.85
PDGFAP04085 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 AC022211.4-201ENST00000625094 2161 ntBASIC20.34■□□□□ 0.85
PDGFAP04085 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.34■□□□□ 0.85
PDGFAP04085 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.34■□□□□ 0.85
PDGFAP04085 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.34■□□□□ 0.85
PDGFAP04085 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.34■□□□□ 0.85
PDGFAP04085 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.34■□□□□ 0.85
PDGFAP04085 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.34■□□□□ 0.85
PDGFAP04085 TPRG1LP1-201ENST00000598702 760 ntBASIC20.34■□□□□ 0.85
PDGFAP04085 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFAP04085 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
PDGFAP04085 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFAP04085 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.33■□□□□ 0.85
PDGFAP04085 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFAP04085 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.33■□□□□ 0.85
PDGFAP04085 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.33■□□□□ 0.85
PDGFAP04085 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.33■□□□□ 0.85
PDGFAP04085 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFAP04085 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFAP04085 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFAP04085 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFAP04085 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFAP04085 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.33■□□□□ 0.84
PDGFAP04085 LINC01529-204ENST00000636474 1715 ntBASIC20.33■□□□□ 0.84
PDGFAP04085 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 AC144652.1-201ENST00000609974 1624 ntBASIC20.32■□□□□ 0.84
PDGFAP04085 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.32■□□□□ 0.84
PDGFAP04085 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFAP04085 AC016769.1-201ENST00000409132 1010 ntBASIC20.32■□□□□ 0.84
PDGFAP04085 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.32■□□□□ 0.84
PDGFAP04085 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.32■□□□□ 0.84
PDGFAP04085 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.32■□□□□ 0.84
PDGFAP04085 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDGFAP04085 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDGFAP04085 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PDGFAP04085 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDGFAP04085 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFAP04085 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.31■□□□□ 0.84
PDGFAP04085 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.31■□□□□ 0.84
PDGFAP04085 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
PDGFAP04085 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.31■□□□□ 0.84
PDGFAP04085 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDGFAP04085 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFAP04085 AP004607.4-201ENST00000530158 1459 ntBASIC20.3■□□□□ 0.84
PDGFAP04085 AC004854.2-201ENST00000608450 1441 ntBASIC20.3■□□□□ 0.84
PDGFAP04085 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.3■□□□□ 0.84
PDGFAP04085 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFAP04085 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.3■□□□□ 0.84
PDGFAP04085 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFAP04085 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFAP04085 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFAP04085 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFAP04085 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFAP04085 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFAP04085 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFAP04085 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFAP04085 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.29■□□□□ 0.84
PDGFAP04085 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFAP04085 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFAP04085 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDGFAP04085 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFAP04085 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFAP04085 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFAP04085 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms