Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTA1P02549 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SPTA1P02549 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTA1P02549 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.92■□□□□ 0.78
SPTA1P02549 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.92■□□□□ 0.78
SPTA1P02549 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SPTA1P02549 SLC7A5P1-201ENST00000568957 537 ntBASIC19.92■□□□□ 0.78
SPTA1P02549 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTA1P02549 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTA1P02549 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 FAM210CP-201ENST00000445714 574 ntBASIC19.91■□□□□ 0.78
SPTA1P02549 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTA1P02549 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTA1P02549 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTA1P02549 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTA1P02549 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTA1P02549 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPTA1P02549 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPTA1P02549 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPTA1P02549 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.9■□□□□ 0.78
SPTA1P02549 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.9■□□□□ 0.78
SPTA1P02549 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTA1P02549 AC105036.2-201ENST00000569468 176 ntBASIC19.9■□□□□ 0.78
SPTA1P02549 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTA1P02549 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTA1P02549 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPTA1P02549 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SPTA1P02549 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SPTA1P02549 AP006294.2-201ENST00000641667 209 ntBASIC19.89■□□□□ 0.77
SPTA1P02549 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPTA1P02549 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTA1P02549 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.89■□□□□ 0.77
SPTA1P02549 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.89■□□□□ 0.77
SPTA1P02549 AC098590.1-201ENST00000468126 897 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTA1P02549 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTA1P02549 AC013268.1-206ENST00000638368 961 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 AC112229.1-201ENST00000639295 961 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SPTA1P02549 AC022211.4-201ENST00000625094 2161 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTA1P02549 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.88■□□□□ 0.77
SPTA1P02549 AL596275.1-201ENST00000423464 877 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 MIR4758-201ENST00000577688 71 ntBASIC19.88■□□□□ 0.77
SPTA1P02549 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SPTA1P02549 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPTA1P02549 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPTA1P02549 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPTA1P02549 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPTA1P02549 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.87■□□□□ 0.77
SPTA1P02549 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.87■□□□□ 0.77
SPTA1P02549 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.87■□□□□ 0.77
SPTA1P02549 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SPTA1P02549 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.87■□□□□ 0.77
SPTA1P02549 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPTA1P02549 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTA1P02549 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPTA1P02549 RPS2P52-201ENST00000469610 820 ntBASIC19.86■□□□□ 0.77
SPTA1P02549 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTA1P02549 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPTA1P02549 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTA1P02549 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SPTA1P02549 AC004687.1-201ENST00000579003 1625 ntBASIC19.86■□□□□ 0.77
SPTA1P02549 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTA1P02549 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.86■□□□□ 0.77
SPTA1P02549 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SPTA1P02549 AL121749.1-202ENST00000609313 2153 ntBASIC19.86■□□□□ 0.77
SPTA1P02549 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTA1P02549 ESRRAP1-201ENST00000400596 1257 ntBASIC19.86■□□□□ 0.77
SPTA1P02549 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.86■□□□□ 0.77
SPTA1P02549 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.86■□□□□ 0.77
SPTA1P02549 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms