Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 AC137767.1-201ENST00000602918 1920 ntBASIC23.53■■□□□ 1.36
HLA-DRAP01903 GUSBP5-202ENST00000510805 1989 ntBASIC23.53■■□□□ 1.36
HLA-DRAP01903 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HLA-DRAP01903 AC080038.3-201ENST00000623346 1952 ntBASIC23.53■■□□□ 1.36
HLA-DRAP01903 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 AC099791.1-201ENST00000416440 715 ntBASIC23.53■■□□□ 1.36
HLA-DRAP01903 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 AP005435.1-201ENST00000529293 1178 ntBASIC23.53■■□□□ 1.36
HLA-DRAP01903 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HLA-DRAP01903 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HLA-DRAP01903 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
HLA-DRAP01903 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HLA-DRAP01903 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HLA-DRAP01903 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HLA-DRAP01903 MIR939-201ENST00000401314 82 ntBASIC23.52■■□□□ 1.36
HLA-DRAP01903 SUDS3P1-201ENST00000505831 966 ntBASIC23.52■■□□□ 1.36
HLA-DRAP01903 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.52■■□□□ 1.36
HLA-DRAP01903 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.51■■□□□ 1.35
HLA-DRAP01903 MIR638-201ENST00000385237 100 ntBASIC23.51■■□□□ 1.35
HLA-DRAP01903 AC027682.1-201ENST00000562846 899 ntBASIC23.51■■□□□ 1.35
HLA-DRAP01903 AL136967.2-201ENST00000623968 743 ntBASIC23.51■■□□□ 1.35
HLA-DRAP01903 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.51■■□□□ 1.35
HLA-DRAP01903 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
HLA-DRAP01903 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HLA-DRAP01903 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 AC010141.3-201ENST00000456659 717 ntBASIC23.5■■□□□ 1.35
HLA-DRAP01903 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 AC126544.1-201ENST00000580842 1059 ntBASIC23.5■■□□□ 1.35
HLA-DRAP01903 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 AC005837.3-201ENST00000612163 286 ntBASIC23.5■■□□□ 1.35
HLA-DRAP01903 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
HLA-DRAP01903 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HLA-DRAP01903 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
HLA-DRAP01903 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.49■■□□□ 1.35
HLA-DRAP01903 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 AC087239.1-201ENST00000622671 572 ntBASIC23.49■■□□□ 1.35
HLA-DRAP01903 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
HLA-DRAP01903 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HLA-DRAP01903 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
HLA-DRAP01903 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.48■■□□□ 1.35
HLA-DRAP01903 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HLA-DRAP01903 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.48■■□□□ 1.35
HLA-DRAP01903 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HLA-DRAP01903 AL117328.2-201ENST00000624617 1940 ntBASIC23.48■■□□□ 1.35
HLA-DRAP01903 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HLA-DRAP01903 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HLA-DRAP01903 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.48■■□□□ 1.35
HLA-DRAP01903 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
HLA-DRAP01903 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.47■■□□□ 1.35
HLA-DRAP01903 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
HLA-DRAP01903 RASA4CP-201ENST00000424092 1398 ntBASIC23.47■■□□□ 1.35
HLA-DRAP01903 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.47■■□□□ 1.35
HLA-DRAP01903 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 AC139530.1-201ENST00000575312 1977 ntBASIC23.47■■□□□ 1.35
HLA-DRAP01903 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HLA-DRAP01903 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HLA-DRAP01903 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.46■■□□□ 1.35
HLA-DRAP01903 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HLA-DRAP01903 AC091305.1-201ENST00000479476 895 ntBASIC23.46■■□□□ 1.35
HLA-DRAP01903 AC142381.2-201ENST00000566120 298 ntBASIC23.46■■□□□ 1.35
HLA-DRAP01903 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
HLA-DRAP01903 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms