Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMC2O95347 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SMC2O95347 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.59■■□□□ 1.53
SMC2O95347 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.59■■□□□ 1.53
SMC2O95347 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SMC2O95347 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SMC2O95347 AC004687.1-201ENST00000579003 1625 ntBASIC24.58■■□□□ 1.53
SMC2O95347 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC2O95347 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SMC2O95347 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC2O95347 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC2O95347 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC2O95347 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SMC2O95347 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SMC2O95347 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SMC2O95347 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.57■■□□□ 1.52
SMC2O95347 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SMC2O95347 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC2O95347 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC2O95347 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC2O95347 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC2O95347 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC2O95347 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.57■■□□□ 1.52
SMC2O95347 FBXW4P1-201ENST00000426721 2239 ntBASIC24.57■■□□□ 1.52
SMC2O95347 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC2O95347 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC2O95347 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.56■■□□□ 1.52
SMC2O95347 AL451085.2-201ENST00000605085 799 ntBASIC24.56■■□□□ 1.52
SMC2O95347 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC2O95347 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SMC2O95347 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.56■■□□□ 1.52
SMC2O95347 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC2O95347 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC2O95347 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC2O95347 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC2O95347 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC2O95347 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC2O95347 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SMC2O95347 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC2O95347 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC2O95347 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC2O95347 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC2O95347 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC2O95347 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.54■■□□□ 1.52
SMC2O95347 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC2O95347 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC2O95347 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.54■■□□□ 1.52
SMC2O95347 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC2O95347 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC2O95347 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
SMC2O95347 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.54■■□□□ 1.52
SMC2O95347 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SMC2O95347 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SMC2O95347 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SMC2O95347 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMC2O95347 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC2O95347 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC2O95347 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.52■■□□□ 1.52
SMC2O95347 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC2O95347 MIR6724-1-201ENST00000616420 92 ntBASIC24.52■■□□□ 1.52
SMC2O95347 MIR6724-2-201ENST00000616483 92 ntBASIC24.52■■□□□ 1.52
SMC2O95347 MIR6724-4-201ENST00000617390 92 ntBASIC24.52■■□□□ 1.52
SMC2O95347 MIR6724-3-201ENST00000622482 92 ntBASIC24.52■■□□□ 1.52
SMC2O95347 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC2O95347 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
SMC2O95347 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SMC2O95347 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.51■■□□□ 1.51
SMC2O95347 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SMC2O95347 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC2O95347 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.51■■□□□ 1.51
SMC2O95347 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SMC2O95347 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC2O95347 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms