Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
GDF9O60383 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF9O60383 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF9O60383 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF9O60383 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
GDF9O60383 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
GDF9O60383 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GDF9O60383 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.49■■□□□ 1.03
GDF9O60383 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.49■■□□□ 1.03
GDF9O60383 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.49■■□□□ 1.03
GDF9O60383 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF9O60383 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.49■■□□□ 1.03
GDF9O60383 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
GDF9O60383 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
GDF9O60383 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF9O60383 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF9O60383 AC144652.1-201ENST00000609974 1624 ntBASIC21.47■■□□□ 1.03
GDF9O60383 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.47■■□□□ 1.03
GDF9O60383 AC098590.1-201ENST00000468126 897 ntBASIC21.47■■□□□ 1.03
GDF9O60383 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF9O60383 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.46■■□□□ 1.03
GDF9O60383 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
GDF9O60383 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.46■■□□□ 1.03
GDF9O60383 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF9O60383 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
GDF9O60383 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.45■■□□□ 1.03
GDF9O60383 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
GDF9O60383 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.45■■□□□ 1.02
GDF9O60383 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.45■■□□□ 1.02
GDF9O60383 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GDF9O60383 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF9O60383 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF9O60383 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.44■■□□□ 1.02
GDF9O60383 DUSP5P2-201ENST00000426873 1033 ntBASIC21.44■■□□□ 1.02
GDF9O60383 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.44■■□□□ 1.02
GDF9O60383 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF9O60383 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.44■■□□□ 1.02
GDF9O60383 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
GDF9O60383 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GDF9O60383 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF9O60383 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GDF9O60383 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF9O60383 AL596275.1-201ENST00000423464 877 ntBASIC21.43■■□□□ 1.02
GDF9O60383 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.43■■□□□ 1.02
GDF9O60383 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.43■■□□□ 1.02
GDF9O60383 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GDF9O60383 AP006294.2-201ENST00000641667 209 ntBASIC21.43■■□□□ 1.02
GDF9O60383 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
GDF9O60383 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF9O60383 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.43■■□□□ 1.02
GDF9O60383 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
GDF9O60383 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GDF9O60383 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF9O60383 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GDF9O60383 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF9O60383 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF9O60383 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF9O60383 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.42■■□□□ 1.02
GDF9O60383 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.42■■□□□ 1.02
GDF9O60383 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF9O60383 SLC7A5P1-201ENST00000568957 537 ntBASIC21.42■■□□□ 1.02
GDF9O60383 AC133552.2-202ENST00000575694 574 ntBASIC21.42■■□□□ 1.02
GDF9O60383 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF9O60383 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDF9O60383 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GDF9O60383 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDF9O60383 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
GDF9O60383 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GDF9O60383 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GDF9O60383 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDF9O60383 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.41■■□□□ 1.02
GDF9O60383 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.41■■□□□ 1.02
GDF9O60383 CNN2P6-201ENST00000439038 900 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms