Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF13O43567 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF13O43567 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF13O43567 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF13O43567 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RNF13O43567 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF13O43567 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF13O43567 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF13O43567 AC004687.1-201ENST00000579003 1625 ntBASIC19.81■□□□□ 0.76
RNF13O43567 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF13O43567 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF13O43567 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF13O43567 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF13O43567 AL024507.2-201ENST00000606070 2574 ntBASIC19.8■□□□□ 0.76
RNF13O43567 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF13O43567 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 MIR3621-201ENST00000580529 85 ntBASIC19.8■□□□□ 0.76
RNF13O43567 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF13O43567 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF13O43567 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF13O43567 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 AL137060.1-201ENST00000618151 2648 ntBASIC19.79■□□□□ 0.76
RNF13O43567 AC092053.2-201ENST00000640557 1818 ntBASIC19.79■□□□□ 0.76
RNF13O43567 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF13O43567 AL356441.2-201ENST00000443009 864 ntBASIC19.79■□□□□ 0.76
RNF13O43567 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF13O43567 AC241377.3-202ENST00000626088 1088 ntBASIC19.79■□□□□ 0.76
RNF13O43567 AC241585.3-202ENST00000628937 1088 ntBASIC19.79■□□□□ 0.76
RNF13O43567 AC245100.8-202ENST00000629247 1058 ntBASIC19.79■□□□□ 0.76
RNF13O43567 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RNF13O43567 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 AC139530.1-201ENST00000575312 1977 ntBASIC19.79■□□□□ 0.76
RNF13O43567 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF13O43567 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF13O43567 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF13O43567 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF13O43567 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF13O43567 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 C11orf96-202ENST00000528572 1834 ntBASIC19.78■□□□□ 0.76
RNF13O43567 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF13O43567 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF13O43567 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RNF13O43567 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF13O43567 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF13O43567 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF13O43567 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF13O43567 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF13O43567 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF13O43567 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RNF13O43567 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF13O43567 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF13O43567 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF13O43567 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF13O43567 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF13O43567 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF13O43567 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms