Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC092068.2-201ENST00000590491 1708 ntBASIC25.14■■□□□ 1.61
ATP2A1O14983 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP2A1O14983 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP2A1O14983 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
ATP2A1O14983 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP2A1O14983 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.13■■□□□ 1.61
ATP2A1O14983 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.13■■□□□ 1.61
ATP2A1O14983 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
ATP2A1O14983 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP2A1O14983 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
ATP2A1O14983 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP2A1O14983 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.12■■□□□ 1.61
ATP2A1O14983 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP2A1O14983 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP2A1O14983 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.11■■□□□ 1.61
ATP2A1O14983 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.11■■□□□ 1.61
ATP2A1O14983 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
ATP2A1O14983 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP2A1O14983 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.11■■□□□ 1.61
ATP2A1O14983 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.11■■□□□ 1.61
ATP2A1O14983 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ATP2A1O14983 ANOS2P-203ENST00000472227 1816 ntBASIC25.1■■□□□ 1.61
ATP2A1O14983 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
ATP2A1O14983 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.1■■□□□ 1.61
ATP2A1O14983 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.1■■□□□ 1.61
ATP2A1O14983 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.1■■□□□ 1.61
ATP2A1O14983 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.1■■□□□ 1.61
ATP2A1O14983 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.1■■□□□ 1.61
ATP2A1O14983 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP2A1O14983 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.1■■□□□ 1.61
ATP2A1O14983 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.1■■□□□ 1.61
ATP2A1O14983 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP2A1O14983 AC004854.2-201ENST00000608450 1441 ntBASIC25.1■■□□□ 1.61
ATP2A1O14983 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP2A1O14983 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP2A1O14983 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.1■■□□□ 1.61
ATP2A1O14983 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.09■■□□□ 1.61
ATP2A1O14983 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP2A1O14983 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATP2A1O14983 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.08■■□□□ 1.61
ATP2A1O14983 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATP2A1O14983 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.08■■□□□ 1.61
ATP2A1O14983 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATP2A1O14983 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ATP2A1O14983 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP2A1O14983 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ATP2A1O14983 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ATP2A1O14983 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.07■■□□□ 1.6
ATP2A1O14983 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.07■■□□□ 1.6
ATP2A1O14983 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP2A1O14983 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP2A1O14983 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
ATP2A1O14983 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP2A1O14983 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.06■■□□□ 1.6
ATP2A1O14983 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.06■■□□□ 1.6
ATP2A1O14983 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ATP2A1O14983 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP2A1O14983 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP2A1O14983 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
ATP2A1O14983 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP2A1O14983 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.05■■□□□ 1.6
ATP2A1O14983 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ATP2A1O14983 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP2A1O14983 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ATP2A1O14983 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.05■■□□□ 1.6
ATP2A1O14983 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.05■■□□□ 1.6
ATP2A1O14983 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP2A1O14983 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATP2A1O14983 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATP2A1O14983 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.04■■□□□ 1.6
ATP2A1O14983 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
ATP2A1O14983 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.04■■□□□ 1.6
ATP2A1O14983 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.04■■□□□ 1.6
ATP2A1O14983 AC137761.2-201ENST00000561729 223 ntBASIC25.04■■□□□ 1.6
ATP2A1O14983 AC145350.3-201ENST00000569033 163 ntBASIC25.04■■□□□ 1.6
ATP2A1O14983 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP2A1O14983 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
ATP2A1O14983 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATP2A1O14983 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATP2A1O14983 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms