Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AL353803.4-201ENST00000565882 1934 ntBASIC19.39■□□□□ 0.69
CCL21O00585 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL21O00585 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.39■□□□□ 0.69
CCL21O00585 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL21O00585 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL21O00585 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL21O00585 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL21O00585 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.38■□□□□ 0.69
CCL21O00585 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL21O00585 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL21O00585 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCL21O00585 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL21O00585 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 MFSD11-216ENST00000590393 1141 ntBASIC19.37■□□□□ 0.69
CCL21O00585 AL121832.2-201ENST00000610979 668 ntBASIC19.37■□□□□ 0.69
CCL21O00585 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL21O00585 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL21O00585 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL21O00585 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL21O00585 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCL21O00585 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCL21O00585 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL21O00585 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCL21O00585 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL21O00585 AC083906.2-201ENST00000511578 360 ntBASIC19.36■□□□□ 0.69
CCL21O00585 AC104187.1-201ENST00000607510 612 ntBASIC19.36■□□□□ 0.69
CCL21O00585 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL21O00585 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL21O00585 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL21O00585 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL21O00585 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.35■□□□□ 0.69
CCL21O00585 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.35■□□□□ 0.69
CCL21O00585 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCL21O00585 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.35■□□□□ 0.69
CCL21O00585 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL21O00585 AC231657.2-201ENST00000624556 255 ntBASIC19.35■□□□□ 0.69
CCL21O00585 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL21O00585 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.35■□□□□ 0.69
CCL21O00585 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL21O00585 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL21O00585 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL21O00585 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL21O00585 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.34■□□□□ 0.69
CCL21O00585 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCL21O00585 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL21O00585 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL21O00585 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL21O00585 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.34■□□□□ 0.69
CCL21O00585 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL21O00585 KRT87P-202ENST00000534226 1464 ntBASIC19.34■□□□□ 0.69
CCL21O00585 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.33■□□□□ 0.69
CCL21O00585 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL21O00585 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCL21O00585 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCL21O00585 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL21O00585 AC007322.1-201ENST00000426983 750 ntBASIC19.33■□□□□ 0.68
CCL21O00585 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL21O00585 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.33■□□□□ 0.68
CCL21O00585 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL21O00585 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL21O00585 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL21O00585 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL21O00585 AC005224.4-201ENST00000583262 1652 ntBASIC19.33■□□□□ 0.68
CCL21O00585 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCL21O00585 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL21O00585 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 TSPY20P-201ENST00000450910 630 ntBASIC19.32■□□□□ 0.68
CCL21O00585 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL21O00585 AC142086.2-201ENST00000569753 217 ntBASIC19.32■□□□□ 0.68
CCL21O00585 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL21O00585 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL21O00585 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCL21O00585 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL21O00585 AC009237.3-201ENST00000393279 1427 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms