Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.52■□□□□ 0.39
UPK2O00526 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK2O00526 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPK2O00526 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.52■□□□□ 0.39
UPK2O00526 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UPK2O00526 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UPK2O00526 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.51■□□□□ 0.39
UPK2O00526 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UPK2O00526 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.51■□□□□ 0.39
UPK2O00526 AC241377.3-202ENST00000626088 1088 ntBASIC17.51■□□□□ 0.39
UPK2O00526 AC241585.3-202ENST00000628937 1088 ntBASIC17.51■□□□□ 0.39
UPK2O00526 AC245100.8-202ENST00000629247 1058 ntBASIC17.51■□□□□ 0.39
UPK2O00526 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK2O00526 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.51■□□□□ 0.39
UPK2O00526 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPK2O00526 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.51■□□□□ 0.39
UPK2O00526 FBXW4P1-201ENST00000426721 2239 ntBASIC17.51■□□□□ 0.39
UPK2O00526 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.5■□□□□ 0.39
UPK2O00526 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.5■□□□□ 0.39
UPK2O00526 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
UPK2O00526 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
UPK2O00526 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPK2O00526 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
UPK2O00526 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
UPK2O00526 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK2O00526 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK2O00526 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK2O00526 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK2O00526 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK2O00526 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK2O00526 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK2O00526 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK2O00526 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.49■□□□□ 0.39
UPK2O00526 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK2O00526 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK2O00526 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.49■□□□□ 0.39
UPK2O00526 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK2O00526 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPK2O00526 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK2O00526 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.48■□□□□ 0.39
UPK2O00526 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 KRT16P3-201ENST00000439127 1283 ntBASIC17.48■□□□□ 0.39
UPK2O00526 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
UPK2O00526 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UPK2O00526 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK2O00526 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK2O00526 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.47■□□□□ 0.39
UPK2O00526 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK2O00526 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK2O00526 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 AC007375.3-201ENST00000600936 2314 ntBASIC17.47■□□□□ 0.39
UPK2O00526 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.47■□□□□ 0.39
UPK2O00526 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK2O00526 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK2O00526 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK2O00526 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK2O00526 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK2O00526 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.46■□□□□ 0.39
UPK2O00526 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms