Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 AC098934.4-201ENST00000564127 592 ntBASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 AC133041.1-202ENST00000642053 222 ntBASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43BA6NCK2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM43BA6NCK2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 AC073210.2-201ENST00000430369 194 ntBASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TRIM43BA6NCK2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TRIM43BA6NCK2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TRIM43BA6NCK2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 AC087239.1-201ENST00000622671 572 ntBASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TRIM43BA6NCK2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43BA6NCK2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 POU5F1P3-201ENST00000428824 1078 ntBASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 AF201337.1-201ENST00000520239 748 ntBASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43BA6NCK2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 KRT87P-202ENST00000534226 1464 ntBASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM43BA6NCK2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 AC105036.2-201ENST00000569468 176 ntBASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 ITM2C-210ENST00000620962 501 ntBASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 OXCT2P1-201ENST00000447263 1535 ntBASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM43BA6NCK2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 CNN2P6-201ENST00000439038 900 ntBASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 MYCNOS-205ENST00000641950 531 ntBASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM43BA6NCK2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 AC005224.4-201ENST00000583262 1652 ntBASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.01■■□□□ 1.43
TRIM43BA6NCK2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms