Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 FEM1AP4-201ENST00000443167 1987 ntBASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
TRDV1A0A1B0GX56 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 AC092667.1-201ENST00000434301 2586 ntBASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 FP325331.1-202ENST00000623531 1380 ntBASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRDV1A0A1B0GX56 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 AC120024.1-201ENST00000562672 995 ntBASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 CA15P2-201ENST00000611168 834 ntBASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRDV1A0A1B0GX56 AL157384.1-201ENST00000445995 2473 ntBASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRDV1A0A1B0GX56 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRDV1A0A1B0GX56 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 AF106564.1-201ENST00000607058 2553 ntBASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 RNF126P1-201ENST00000567452 1320 ntBASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRDV1A0A1B0GX56 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRDV1A0A1B0GX56 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRDV1A0A1B0GX56 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRDV1A0A1B0GX56 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRDV1A0A1B0GX56 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms