Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 CD99P1-205ENST00000527459 561 ntBASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AC104187.1-201ENST00000607510 612 ntBASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.69■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01124-201ENST00000409786 2117 ntBASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AC083906.2-201ENST00000511578 360 ntBASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AL121832.2-201ENST00000610979 668 ntBASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AL050303.2-201ENST00000619798 666 ntBASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AC004812.2-201ENST00000611079 2094 ntBASIC21.67■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 AC005224.4-201ENST00000583262 1652 ntBASIC21.66■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 TSPY20P-201ENST00000450910 630 ntBASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.65■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KRT87P-202ENST00000534226 1464 ntBASIC21.64■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00543-201ENST00000567234 1845 ntBASIC21.64■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MSANTD3-TMEFF1A0A0A6YYJ0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC142086.2-201ENST00000569753 217 ntBASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms