Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAV27A0A087WT01 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAV27A0A087WT01 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 AL035685.1-201ENST00000636663 812 ntBASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV27A0A087WT01 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRAV27A0A087WT01 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 AL499627.2-201ENST00000606283 725 ntBASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV27A0A087WT01 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV27A0A087WT01 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV27A0A087WT01 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 CA15P2-201ENST00000611168 834 ntBASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV27A0A087WT01 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 AC006455.2-201ENST00000429931 906 ntBASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV27A0A087WT01 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms