Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 LINC00565-201ENST00000562710 2331 ntBASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV30A0A087WSZ9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV30A0A087WSZ9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV30A0A087WSZ9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV30A0A087WSZ9 AC139530.1-201ENST00000575312 1977 ntBASIC17.08■□□□□ 0.33
TRAV30A0A087WSZ9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 AL117332.1-201ENST00000622628 974 ntBASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 AC241377.3-202ENST00000626088 1088 ntBASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 AC241585.3-202ENST00000628937 1088 ntBASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 AC245100.8-202ENST00000629247 1058 ntBASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV30A0A087WSZ9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 C11orf96-202ENST00000528572 1834 ntBASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV30A0A087WSZ9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 AC004687.1-201ENST00000579003 1625 ntBASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV30A0A087WSZ9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 AL451085.2-201ENST00000605085 799 ntBASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 AL499627.2-201ENST00000606283 725 ntBASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 AC080038.3-201ENST00000623346 1952 ntBASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV30A0A087WSZ9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms