Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CLIC4Q9Y696 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CLIC4Q9Y696 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CLIC4Q9Y696 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CLIC4Q9Y696 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
CLIC4Q9Y696 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLIC4Q9Y696 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLIC4Q9Y696 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 MIR3621-201ENST00000580529 85 ntBASIC25.05■■□□□ 1.6
CLIC4Q9Y696 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CLIC4Q9Y696 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLIC4Q9Y696 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.04■■□□□ 1.6
CLIC4Q9Y696 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLIC4Q9Y696 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 AL356740.2-201ENST00000601559 647 ntBASIC25.03■■□□□ 1.6
CLIC4Q9Y696 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLIC4Q9Y696 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 AC099791.2-201ENST00000605725 427 ntBASIC25.02■■□□□ 1.6
CLIC4Q9Y696 AC241377.3-202ENST00000626088 1088 ntBASIC25.02■■□□□ 1.6
CLIC4Q9Y696 AC241585.3-202ENST00000628937 1088 ntBASIC25.02■■□□□ 1.6
CLIC4Q9Y696 AC245100.8-202ENST00000629247 1058 ntBASIC25.02■■□□□ 1.6
CLIC4Q9Y696 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.02■■□□□ 1.6
CLIC4Q9Y696 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 CA15P2-201ENST00000611168 834 ntBASIC25.01■■□□□ 1.59
CLIC4Q9Y696 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLIC4Q9Y696 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
CLIC4Q9Y696 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CLIC4Q9Y696 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLIC4Q9Y696 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25■■□□□ 1.59
CLIC4Q9Y696 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25■■□□□ 1.59
CLIC4Q9Y696 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25■■□□□ 1.59
CLIC4Q9Y696 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 AL512631.2-201ENST00000604634 923 ntBASIC24.99■■□□□ 1.59
CLIC4Q9Y696 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 pRNA.6-201ENST00000610482 90 ntBASIC24.99■■□□□ 1.59
CLIC4Q9Y696 pRNA.5-201ENST00000612139 90 ntBASIC24.99■■□□□ 1.59
CLIC4Q9Y696 pRNA.11-201ENST00000618423 90 ntBASIC24.99■■□□□ 1.59
CLIC4Q9Y696 pRNA.13-201ENST00000619112 90 ntBASIC24.99■■□□□ 1.59
CLIC4Q9Y696 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLIC4Q9Y696 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 AC007375.3-201ENST00000600936 2314 ntBASIC24.98■■□□□ 1.59
CLIC4Q9Y696 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms