Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB7Q9Y5E2 OXCT2P1-201ENST00000447263 1535 ntBASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 ABCB10P4-201ENST00000566803 2184 ntBASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB7Q9Y5E2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 KRT19P1-201ENST00000405746 1186 ntBASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB7Q9Y5E2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 HLA-L-209ENST00000420110 1011 ntBASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB7Q9Y5E2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 CDCA4P2-201ENST00000441182 718 ntBASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDHB7Q9Y5E2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 BID-214ENST00000617586 542 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 AC073111.5-205ENST00000641717 521 ntBASIC23.7■■□□□ 1.38
PCDHB7Q9Y5E2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDHB7Q9Y5E2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHB7Q9Y5E2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 RAP2CP1-201ENST00000605103 478 ntBASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB7Q9Y5E2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 AC026185.1-201ENST00000445748 174 ntBASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 AC079140.4-201ENST00000507448 529 ntBASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms