Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 AC021242.3-201ENST00000607598 1377 ntBASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 DUX4L4-201ENST00000566884 1269 ntBASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
MRPS28Q9Y2Q9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 BX664725.1-201ENST00000438252 379 ntBASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 AL137060.1-201ENST00000618151 2648 ntBASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPS28Q9Y2Q9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
MRPS28Q9Y2Q9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPS28Q9Y2Q9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPS28Q9Y2Q9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.77■□□□□ 0.6
MRPS28Q9Y2Q9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
MRPS28Q9Y2Q9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms