Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.47■□□□□ 0.71
COPS3Q9UNS2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPS3Q9UNS2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 DUX4L4-201ENST00000566884 1269 ntBASIC19.46■□□□□ 0.71
COPS3Q9UNS2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPS3Q9UNS2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 RNF165-205ENST00000588679 2904 ntBASIC19.45■□□□□ 0.7
COPS3Q9UNS2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
COPS3Q9UNS2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 AC009086.3-201ENST00000623486 1008 ntBASIC19.44■□□□□ 0.7
COPS3Q9UNS2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS3Q9UNS2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 BX664725.1-201ENST00000438252 379 ntBASIC19.43■□□□□ 0.7
COPS3Q9UNS2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS3Q9UNS2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COPS3Q9UNS2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 AC010542.4-201ENST00000563151 1910 ntBASIC19.41■□□□□ 0.7
COPS3Q9UNS2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 AC004687.1-201ENST00000579003 1625 ntBASIC19.41■□□□□ 0.7
COPS3Q9UNS2 AC009102.2-201ENST00000606772 1639 ntBASIC19.41■□□□□ 0.7
COPS3Q9UNS2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms