Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 MIR638-201ENST00000385237 100 ntBASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 SUDS3P1-201ENST00000505831 966 ntBASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 AC008764.7-201ENST00000593779 1081 ntBASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 AC068587.7-201ENST00000641602 218 ntBASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA4Q9UN74 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 MIR939-201ENST00000401314 82 ntBASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 AF213884.3-201ENST00000563833 479 ntBASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 CA15P2-201ENST00000611168 834 ntBASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA4Q9UN74 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 AC233723.2-201ENST00000623798 2106 ntBASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 AP005435.1-201ENST00000529293 1178 ntBASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 AC027682.1-201ENST00000562846 899 ntBASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 AL136967.2-201ENST00000623968 743 ntBASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA4Q9UN74 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 AC127496.7-201ENST00000625110 1798 ntBASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 AC099791.1-201ENST00000416440 715 ntBASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 AC005837.3-201ENST00000612163 286 ntBASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA4Q9UN74 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.08■■□□□ 1.6
PCDHA4Q9UN74 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA4Q9UN74 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
PCDHA4Q9UN74 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHA4Q9UN74 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 AC126544.1-201ENST00000580842 1059 ntBASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 RASA4CP-201ENST00000424092 1398 ntBASIC25.05■■□□□ 1.6
PCDHA4Q9UN74 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 AC091305.1-201ENST00000479476 895 ntBASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 AC137767.1-201ENST00000602918 1920 ntBASIC25.04■■□□□ 1.6
PCDHA4Q9UN74 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 AC010141.3-201ENST00000456659 717 ntBASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 AC087239.1-201ENST00000622671 572 ntBASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA4Q9UN74 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms