Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 AC087742.1-201ENST00000575880 1738 ntBASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 AL031602.1-201ENST00000633169 911 ntBASIC25.14■■□□□ 1.62
PCDHA6Q9UN73 LINC01960-201ENST00000563759 1884 ntBASIC25.14■■□□□ 1.61
PCDHA6Q9UN73 TSPY26P-201ENST00000476365 1326 ntBASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 MIR935-201ENST00000401179 91 ntBASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDHA6Q9UN73 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 IGHV3-19-201ENST00000521488 291 ntBASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 AP005435.1-201ENST00000529293 1178 ntBASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA6Q9UN73 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 IRS3P-201ENST00000223076 1006 ntBASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA6Q9UN73 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA6Q9UN73 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDHA6Q9UN73 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHA6Q9UN73 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHA6Q9UN73 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms