Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 AC005703.6-201ENST00000623265 1329 ntBASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
LIN7CQ9NUP9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LIN7CQ9NUP9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LIN7CQ9NUP9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIN7CQ9NUP9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LIN7CQ9NUP9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIN7CQ9NUP9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIN7CQ9NUP9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 AC080038.3-201ENST00000623346 1952 ntBASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms